|
|
UMP + H2O <=> uridine + phosphate
|
3.1.3.1
alkaline phosphatase
3.1.3.2
acid phosphatase
3.1.3.25
inositol-phosphate phosphatase
3.1.3.31
nucleotidase
3.1.3.5
5'-nucleotidase
3.1.3.89
5'-deoxynucleotidase
3.1.3.91
7-methylguanosine nucleotidase
3.1.4.16
2',3'-cyclic-nucleotide 2'-phosphodiesterase
3.6.1.9
nucleotide diphosphatase
|
–
–
–
–
–
–
–
–
–
|
|
BRENDA:
BS382924
KEGG:
R00963
MetaCyc:
RXN-14025
SABIO-RK:
210
|
|
|
|
2''-deoxyuridine + phosphate <=> 2-deoxy-alpha-D-ribose_1-phosphate + Uracil
|
2.4.2.1
purine-nucleoside phosphorylase
2.4.2.2
pyrimidine-nucleoside phosphorylase
2.4.2.3
uridine phosphorylase
2.4.2.4
thymidine phosphorylase
|
–
–
–
–
|
|
BRENDA:
BR47487;
BS354611
KEGG:
R02484
MetaCyc:
URA-PHOSPH-RXN
SABIO-RK:
511
|
|
|
|
Uracil + acceptor + H2O <=> Barbiturate + reduced_acceptor + H+
|
1.17.99.4
uracil/thymine dehydrogenase
|
–
|
|
BRENDA:
BR29372
KEGG:
R00976
MetaCyc:
URACIL-DEHYDROGENASE-RXN
|
|
|
|
dUTP + H2O <=> H+ + dUMP + diphosphate
|
3.6.1
3.6.1.23
dUTP diphosphatase
3.6.1.8
ATP diphosphatase
3.6.1.9
nucleotide diphosphatase
|
–
–
–
–
|
|
BRENDA:
BR22764
KEGG:
R02100
MetaCyc:
DUTP-PYROP-RXN
SABIO-RK:
365
|
|
|
|
ATP + CMP <=> ADP + CDP
|
2.7.1.48
uridine/cytidine kinase
2.7.4.14
UMP/CMP kinase
2.7.4.25
(d)CMP kinase
2.7.4.3
adenylate kinase
2.7.4.4
nucleoside-phosphate kinase
2.7.4.8
guanylate kinase
|
–
–
–
–
–
–
|
|
BRENDA:
BS359742
KEGG:
R00512
MetaCyc:
RXN-11832
SABIO-RK:
83
|
|
|
|
ATP + UTP + NH3 <=> ADP + phosphate + CTP + H+
|
6.3.4.2
CTP synthase (glutamine hydrolysing)
|
–
|
|
BRENDA:
BR50556
KEGG:
R00571
MetaCyc:
RXN-14325
SABIO-RK:
458
|
|
|
|
ITP + cytidine <=> IDP + CMP
|
2.7.1.48
uridine/cytidine kinase
2.7.1.B20
|
–
–
|
|
BRENDA:
BS428712
KEGG:
R00962
|
|
|
|
phosphate + uridine <=> alpha-D-ribose_1-phosphate + Uracil
|
2.4.2.2
pyrimidine-nucleoside phosphorylase
2.4.2.3
uridine phosphorylase
2.4.2.4
thymidine phosphorylase
|
–
–
–
|
|
BRENDA:
BR47549
KEGG:
R01876
MetaCyc:
URPHOS-RXN
SABIO-RK:
204
|
|
|
|
H+ + H2O + dCTP <=> NH3 + dUTP
|
3.5.4.13
dCTP deaminase
|
–
|
|
BRENDA:
BR22734
KEGG:
R02325
MetaCyc:
DCTP-DEAM-RXN
|
|
|
|
formate + UTP + H+ <=> dUTP + CO2 + H2O
|
1.1.98.6
ribonucleoside-triphosphate reductase (formate)
|
–
|
|
BRENDA:
BS439976
KEGG:
R11635
MetaCyc:
RXN0-724
|
|
|
|
H+ + H2O + 2''-deoxycytidine <=> 2''-deoxyuridine + NH3
|
3.5.4.12
dCMP deaminase
3.5.4.5
cytidine deaminase
|
–
–
|
|
BRENDA:
BR22735
KEGG:
R02485
MetaCyc:
CYTIDEAM-RXN
SABIO-RK:
364
|
|
|
|
uridine_2''3''-cyclic_monophosphate + H2O <=> uridine_3''-monophosphate + H+
|
3.1.4.16
2',3'-cyclic-nucleotide 2'-phosphodiesterase
4.6.1.18
pancreatic ribonuclease
|
–
–
|
|
BRENDA:
BS453564;
BS93168
KEGG:
R03538
MetaCyc:
RXN-14091
SABIO-RK:
516
|
|
|
|
orotidine_5''-phosphate + diphosphate <=> 5-phospho-alpha-D-ribose_1-diphosphate + Orotate
|
2.4.2.10
orotate phosphoribosyltransferase
|
–
|
|
BRENDA:
BR44268
KEGG:
R01870
MetaCyc:
OROPRIBTRANS-RXN
SABIO-RK:
401
|
|
|
|
UTP + H2O <=> UMP + diphosphate + H+
|
3.1.3.31
nucleotidase
3.1.4.1
phosphodiesterase I
3.6.1.23
dUTP diphosphatase
3.6.1.65
(d)CTP diphosphatase
3.6.1.8
ATP diphosphatase
3.6.1.9
nucleotide diphosphatase
|
–
–
–
–
–
–
|
|
BRENDA:
BS139757
KEGG:
R00662
MetaCyc:
RXN-14139
SABIO-RK:
202
|
|
|
|
dCTP + cytidine <=> dCDP + CMP
|
2.7.1.48
uridine/cytidine kinase
|
–
|
|
BRENDA:
BS357584
KEGG:
R02371
|
|
|
|
thymidine + acceptor <=> 2'-deoxynucleoside + thymine
|
2.4.2.6
nucleoside deoxyribosyltransferase
|
–
|
|
KEGG:
R02806
|
|
|
|
uridine_3''-monophosphate + H2O <=> uridine + phosphate
|
3.1.3.1
alkaline phosphatase
3.1.3.2
acid phosphatase
3.1.3.25
inositol-phosphate phosphatase
3.1.3.31
nucleotidase
3.1.3.6
3'-nucleotidase
3.1.30.1
Aspergillus nuclease S1
3.1.4.16
2',3'-cyclic-nucleotide 2'-phosphodiesterase
|
–
–
–
–
–
–
–
|
|
BRENDA:
BS64626
KEGG:
R01877
MetaCyc:
RXN-14115
SABIO-RK:
487
|
|
|
|
dCDP + thioredoxin_disulfide + H2O <=> CDP + thioredoxin
|
1.17.4.1
ribonucleoside-diphosphate reductase
1.17.4.2
ribonucleoside-triphosphate reductase (thioredoxin)
|
–
–
|
|
BRENDA:
BS287792
KEGG:
R02024
MetaCyc:
CDPREDUCT-RXN
SABIO-RK:
240
|
|
|
|
cytidine + phosphate <=> cytosine + alpha-D-ribose_1-phosphate
|
2.4.2.2
pyrimidine-nucleoside phosphorylase
2.4.2.3
uridine phosphorylase
|
–
–
|
|
BRENDA:
BS355365
KEGG:
R02296
|
|
|
|
L-aspartate + Carbamoyl_phosphate <=> H+ + L-carbamoyl-L-aspartate + phosphate
|
2.1.3.2
aspartate carbamoyltransferase
|
–
|
|
BRENDA:
BR43949
KEGG:
R01397
MetaCyc:
ASPCARBTRANS-RXN
SABIO-RK:
398
|
|
|
|
UTP + uridine <=> UDP + UMP
|
2.7.1.48
uridine/cytidine kinase
|
–
|
|
KEGG:
R00967
|
|
|
|
2''-deoxycytidine + ATP <=> dCMP + ADP + H+
|
2.7.1.113
deoxyguanosine kinase
2.7.1.145
deoxynucleoside kinase
2.7.1.20
adenosine kinase
2.7.1.21
thymidine kinase
2.7.1.213
cytidine kinase
2.7.1.74
deoxycytidine kinase
2.7.1.76
2'-deoxyadenosine kinase
|
–
–
–
–
–
–
–
|
|
BRENDA:
BS353765
KEGG:
R01666
MetaCyc:
RXN-14093
SABIO-RK:
481
|
|
|
|
diphosphate + UMP <=> 5-phospho-alpha-D-ribose_1-diphosphate + Uracil
|
2.4.2.10
orotate phosphoribosyltransferase
2.4.2.9
uracil phosphoribosyltransferase
|
–
–
|
|
BRENDA:
BR47535
KEGG:
R00966
MetaCyc:
URACIL-PRIBOSYLTRANS-RXN
SABIO-RK:
10227;
86
|
|
|
|
5,6-dihydrouracil + NAD+ <=> Uracil + NADH + H+
|
1.3.1.1
dihydropyrimidine dehydrogenase (NAD+)
1.3.1.2
dihydropyrimidine dehydrogenase (NADP+)
|
–
–
|
|
BRENDA:
BR33754
KEGG:
R00977
MetaCyc:
DIHYDROURACIL-DEHYDROGENASE-NAD+-RXN
SABIO-RK:
470
|
|
|
|
dTDP + ATP <=> dTTP + ADP
|
2.7.4.6
nucleoside-diphosphate kinase
|
–
|
|
BRENDA:
BS358250
KEGG:
R02093
MetaCyc:
DTDPKIN-RXN
SABIO-RK:
423
|
|
|
|
formate + CTP + H+ <=> dCTP + CO2 + H2O
|
1.1.98.6
ribonucleoside-triphosphate reductase (formate)
|
–
|
|
BRENDA:
BS439364
KEGG:
R11636
MetaCyc:
RXN0-723
|
|
|
|
dUMP + 5,10-methylenetetrahydrofolate + NADPH + H+ <=> dTMP + tetrahydrofolate + NADP+
|
1.5.1.3
dihydrofolate reductase
2.1.1.148
thymidylate synthase (FAD)
|
–
–
|
|
BRENDA:
BR47450
KEGG:
R06613
MetaCyc:
RXN-8850
SABIO-RK:
7840
|
|
|
|
dUTP + H2O <=> dUDP + phosphate + H+
|
3.6.1.15
nucleoside-triphosphate phosphatase
3.6.1.39
thymidine-triphosphatase
3.6.4.12
DNA helicase
|
–
–
–
|
|
BRENDA:
BS141340
KEGG:
R02330
MetaCyc:
RXN-14219
SABIO-RK:
506
|
|
|
|
P1,P4-bis(5''-uridyl)_tetraphosphate + H2O <=> UTP + UMP
|
3.1.4.1
phosphodiesterase I
3.6.1.17
bis(5'-nucleosyl)-tetraphosphatase (asymmetrical)
|
–
–
|
|
BRENDA:
BS141231
KEGG:
R00969
|
|
|
|
dCTP + H2O <=> dUMP + diphosphate + NH3
|
3.5.4.30
dCTP deaminase (dUMP-forming)
|
–
|
|
BRENDA:
BR48302
KEGG:
R07307
MetaCyc:
3.5.4.30-RXN
SABIO-RK:
7649
|
|
|
|
(R)-5,6-Dihydrothymine + NAD+ <=> thymine + NADH + H+
|
1.3.1.1
dihydropyrimidine dehydrogenase (NAD+)
|
–
|
|
KEGG:
R11026
|
|
|
|
dCTP + thioredoxin_disulfide + H2O <=> CTP + thioredoxin
|
1.17.4.1
ribonucleoside-diphosphate reductase
1.17.4.2
ribonucleoside-triphosphate reductase (thioredoxin)
|
–
–
|
|
BRENDA:
BS287789
KEGG:
R02022
MetaCyc:
RXN-21264
SABIO-RK:
491
|
|
|
|
L-dihydroorotate + fumarate <=> Orotate + succinate
|
1.3.98.1
dihydroorotate dehydrogenase (fumarate)
|
–
|
|
BRENDA:
BR49571
KEGG:
R01867
MetaCyc:
RXN-9929
SABIO-RK:
7103
|
|
|
|
L-dihydroorotate + a_quinone <=> Orotate + a_quinol
|
1.3.5.2
dihydroorotate dehydrogenase (quinone)
|
–
|
|
BRENDA:
BR48993
KEGG:
R01868
|
|
|
|
5,10-methylenetetrahydrofolate + dUMP <=> dTMP + 7,8-dihydrofolate
|
2.1.1.45
thymidylate synthase
|
–
|
|
BRENDA:
BR43900;
BS319728
KEGG:
R02101
MetaCyc:
THYMIDYLATESYN-RXN
SABIO-RK:
88
|
|
|
|
dUTP + cytidine <=> dUDP + CMP
|
2.7.1.48
uridine/cytidine kinase
|
–
|
|
BRENDA:
BS357583
KEGG:
R02372
|
|
|
|
CDP + H2O <=> phosphate + CMP + H+
|
3.1.3.2
acid phosphatase
3.1.3.31
nucleotidase
3.1.4.16
2',3'-cyclic-nucleotide 2'-phosphodiesterase
3.1.4.37
2',3'-cyclic-nucleotide 3'-phosphodiesterase
3.6.1.15
nucleoside-triphosphate phosphatase
3.6.1.5
apyrase
3.6.1.6
nucleoside diphosphate phosphatase
3.6.1.9
nucleotide diphosphatase
|
–
–
–
–
–
–
–
–
|
|
BRENDA:
BS93276
KEGG:
R00514
MetaCyc:
RXN-12198
SABIO-RK:
207
|
|
|
|
dCDP + H2O <=> dCMP + phosphate + H+
|
3.6.1.12
dCTP diphosphatase
3.6.1.15
nucleoside-triphosphate phosphatase
3.6.1.55
8-oxo-dGTP diphosphatase
3.6.1.6
nucleoside diphosphate phosphatase
3.6.1.9
nucleotide diphosphatase
|
–
–
–
–
–
|
|
BRENDA:
BS384570
KEGG:
R01667
MetaCyc:
RXN-14187
SABIO-RK:
482
|
|
|
|
UDP-glucose + H2O <=> UMP + alpha-D-aldose_1-phosphate + H+
|
3.1.4.1
phosphodiesterase I
3.6.1.45
UDP-sugar diphosphatase
3.6.1.8
ATP diphosphatase
3.6.1.9
nucleotide diphosphatase
|
–
–
–
–
|
|
BRENDA:
BR3333;
BS139792;
BS402967
KEGG:
R00287;
R03986
MetaCyc:
UDPSUGARHYDRO-RXN
SABIO-RK:
446
|
|
|
|
dUDP + ATP <=> dUTP + ADP
|
2.7.4.6
nucleoside-diphosphate kinase
|
–
|
|
BRENDA:
BS387815
KEGG:
R02331
MetaCyc:
DUDPKIN-RXN
SABIO-RK:
421
|
|
|
|
pseudouridine + ATP <=> H+ + pseudouridine_5''-phosphate + ADP
|
2.7.1.83
pseudouridine kinase
|
–
|
|
BRENDA:
BR47387
KEGG:
R03315
MetaCyc:
PSEUDOURIDINE-KINASE-RXN
|
|
|
|
D-ribose_5-phosphate + Uracil <=> H2O + pseudouridine_5''-phosphate
|
4.2.1.70
pseudouridylate synthase
|
–
|
|
BRENDA:
BR447
KEGG:
R01055
MetaCyc:
RXN0-5398
|
|
|
|
dUTP + thioredoxin_disulfide + H2O <=> UTP + thioredoxin
|
1.17.4.2
ribonucleoside-triphosphate reductase (thioredoxin)
|
–
|
|
BRENDA:
BS287790
KEGG:
R02023
MetaCyc:
RXN-21265
|
|
|
|
H+ + H2O + cytidine <=> uridine + NH3
|
3.5.4.5
cytidine deaminase
|
–
|
|
BRENDA:
BR22742
KEGG:
R01878
MetaCyc:
CYTIDEAM2-RXN
SABIO-RK:
89
|
|
|
|
cytidine-3''-monophosphate + H2O <=> cytidine + phosphate
|
3.1.3.1
alkaline phosphatase
3.1.3.2
acid phosphatase
3.1.3.25
inositol-phosphate phosphatase
3.1.3.31
nucleotidase
3.1.3.6
3'-nucleotidase
3.1.4.16
2',3'-cyclic-nucleotide 2'-phosphodiesterase
|
–
–
–
–
–
–
|
|
BRENDA:
BS64631
KEGG:
R02370
MetaCyc:
RXN-14090
SABIO-RK:
508
|
|
|
|
thiamine_diphosphate + H2O <=> H+ + thiamine_phosphate + phosphate
|
3.1.3.1
alkaline phosphatase
3.1.3.100
thiamine phosphate phosphatase
3.1.3.2
acid phosphatase
3.6.1
3.6.1.15
nucleoside-triphosphate phosphatase
3.6.1.28
thiamine-triphosphatase
3.6.1.5
apyrase
3.6.1.55
8-oxo-dGTP diphosphatase
3.6.1.6
nucleoside diphosphate phosphatase
|
–
–
–
–
–
–
–
–
–
|
|
BRENDA:
BS141322;
BS141393
KEGG:
R00615;
R02092
MetaCyc:
RXN-14213;
RXN0-3542
SABIO-RK:
495;
9603
|
|
|
|
dTTP + H2O <=> dTDP + phosphate + H+
|
3.1.3.2
acid phosphatase
3.6.1.15
nucleoside-triphosphate phosphatase
3.6.1.39
thymidine-triphosphatase
3.6.1.5
apyrase
3.6.1.9
nucleotide diphosphatase
3.6.4.12
DNA helicase
|
–
–
–
–
–
–
|
|
BRENDA:
BR22772
KEGG:
R02095
MetaCyc:
THYMIDINE-TRIPHOSPHATASE-RXN
SABIO-RK:
9599
|
|
|
|
dCTP + uridine <=> dCDP + UMP
|
2.7.1.48
uridine/cytidine kinase
|
–
|
|
BRENDA:
BS357597
KEGG:
R02327
|
|
|
|
Uracil + FMNH2 + O2 <=> (Z)-3-ureidoacrylate_peracid + FMN
|
1.14.99.46
pyrimidine oxygenase
|
–
|
|
BRENDA:
BS418113
KEGG:
R09936
|
|
|
|
CDP + ATP <=> CTP + ADP
|
2.7.4.3
adenylate kinase
2.7.4.6
nucleoside-diphosphate kinase
|
–
–
|
|
BRENDA:
BS358244
KEGG:
R00570
MetaCyc:
CDPKIN-RXN
SABIO-RK:
208
|
|
|
|
dCTP + H2O <=> H+ + dCMP + diphosphate
|
3.6.1.12
dCTP diphosphatase
3.6.1.23
dUTP diphosphatase
3.6.1.55
8-oxo-dGTP diphosphatase
3.6.1.65
(d)CTP diphosphatase
3.6.1.8
ATP diphosphatase
3.6.1.9
nucleotide diphosphatase
|
–
–
–
–
–
–
|
|
BRENDA:
BR22752
KEGG:
R01668
MetaCyc:
DCTP-PYROPHOSPHATASE-RXN
SABIO-RK:
483
|
|
|
|
dCMP + H2O + 5,10-methylenetetrahydrofolate <=> 2''-deoxy-5-hydroxymethylcytidine_5''-phosphate + tetrahydrofolate
|
2.1.2.8
deoxycytidylate 5-hydroxymethyltransferase
2.1.2.B2
|
–
–
|
|
BRENDA:
BR43946
KEGG:
R01669
MetaCyc:
2.1.2.8-RXN
|
|
|
|
H2O + CTP <=> H+ + phosphate + CDP
|
3.1.3.2
acid phosphatase
3.1.3.31
nucleotidase
3.1.3.5
5'-nucleotidase
3.1.3.8
3-phytase
3.1.4.16
2',3'-cyclic-nucleotide 2'-phosphodiesterase
3.1.4.37
2',3'-cyclic-nucleotide 3'-phosphodiesterase
3.6.1.15
nucleoside-triphosphate phosphatase
3.6.1.28
thiamine-triphosphatase
3.6.1.3
adenosinetriphosphatase
3.6.1.5
apyrase
3.6.1.6
nucleoside diphosphate phosphatase
3.6.1.9
nucleotide diphosphatase
3.6.1.B17
3.6.4.12
DNA helicase
3.6.4.13
RNA helicase
3.6.4.B10
3.6.4.B6
5.6.1.5
proteasome ATPase
7.1.2.2
H+-transporting two-sector ATPase
7.6.2.2
ABC-type xenobiotic transporter
|
–
–
–
–
–
–
–
–
–
–
–
–
–
–
–
–
–
–
–
–
|
|
BRENDA:
BS141413
KEGG:
R00569
MetaCyc:
RXN-12195
SABIO-RK:
209
|
|
|
|
3-hydroxypropionate + NADP+ <=> malonate_semialdehyde + NADPH + H+
|
1.1.1
1.1.1.2
alcohol dehydrogenase (NADP+)
1.1.1.276
serine 3-dehydrogenase (NADP+)
1.1.1.298
3-hydroxypropionate dehydrogenase (NADP+)
|
–
–
–
–
|
|
BRENDA:
BR49111
KEGG:
R09289
MetaCyc:
RXN-8974
SABIO-RK:
12224
|
|
|
|
dATP + cytidine <=> dADP + CMP
|
2.7.1.48
uridine/cytidine kinase
|
–
|
|
BRENDA:
BS357582
KEGG:
R01548
|
|
|
|
5,6-dihydrouracil + NADP+ <=> Uracil + NADPH + H+
|
1.3.1.1
dihydropyrimidine dehydrogenase (NAD+)
1.3.1.2
dihydropyrimidine dehydrogenase (NADP+)
|
–
–
|
|
BRENDA:
BR33762
KEGG:
R00978
MetaCyc:
1.3.1.2-RXN
SABIO-RK:
471
|
|
|
|
3-Oxo-3-ureidoisobutyrate + H2O <=> methylmalonate + Urea
|
3.5.1.95
N-malonylurea hydrolase
|
–
|
|
KEGG:
R10778
|
|
|
|
phosphate + thymidine <=> 2-deoxy-alpha-D-ribose_1-phosphate + thymine
|
2.4.2.2
pyrimidine-nucleoside phosphorylase
2.4.2.3
uridine phosphorylase
2.4.2.4
thymidine phosphorylase
|
–
–
–
|
|
BRENDA:
BR47547;
BS355326
KEGG:
R01570
MetaCyc:
THYM-PHOSPH-RXN
SABIO-RK:
79
|
|
|
|
ATP + L-glutamine + HCO3- + H2O <=> L-glutamate + Carbamoyl_phosphate + ADP + phosphate + H+
|
6.3.4.16
carbamoyl-phosphate synthase (ammonia)
6.3.5.5
carbamoyl-phosphate synthase (glutamine-hydrolysing)
|
–
–
|
|
BRENDA:
BR152
KEGG:
R00575
MetaCyc:
CARBPSYN-RXN
SABIO-RK:
203
|
|
|
|
dCMP + H2O <=> 2''-deoxycytidine + phosphate
|
3.1.3.1
alkaline phosphatase
3.1.3.2
acid phosphatase
3.1.3.31
nucleotidase
3.1.3.5
5'-nucleotidase
3.1.3.89
5'-deoxynucleotidase
|
–
–
–
–
–
|
|
BRENDA:
BS364579
KEGG:
R01664
MetaCyc:
RXN0-5292
SABIO-RK:
480
|
|
|
|
H+ + 2-aminoacrylate + H2O <=> malonate_semialdehyde + NH3
|
3.5.1
|
–
|
|
KEGG:
R09983
MetaCyc:
RXN0-6452
|
|
|
|
L-dihydroorotate + NAD+ <=> H+ + Orotate + NADH
|
1.3.1.14
dihydroorotate dehydrogenase (NAD+)
|
–
|
|
BRENDA:
BR36799
KEGG:
R01869
MetaCyc:
OROTATE-REDUCTASE-NADH-RXN
SABIO-RK:
486
|
|
|
|
CMP + H2O <=> cytidine + phosphate
|
3.1.3.1
alkaline phosphatase
3.1.3.2
acid phosphatase
3.1.3.25
inositol-phosphate phosphatase
3.1.3.31
nucleotidase
3.1.3.5
5'-nucleotidase
3.1.3.91
7-methylguanosine nucleotidase
|
–
–
–
–
–
–
|
|
BRENDA:
BR50761
KEGG:
R00511
MetaCyc:
RXN-14026
SABIO-RK:
211
|
|
|
|
dATP + uridine <=> dADP + UMP
|
2.7.1.48
uridine/cytidine kinase
|
–
|
|
BRENDA:
BS357594
KEGG:
R01549
|
|
|
|
cytidine + ATP <=> CMP + ADP + H+
|
2.7.1.145
deoxynucleoside kinase
2.7.1.213
cytidine kinase
2.7.1.48
uridine/cytidine kinase
2.7.1.74
deoxycytidine kinase
2.7.1.76
2'-deoxyadenosine kinase
2.7.1.B20
|
–
–
–
–
–
–
|
|
BRENDA:
BR51546
KEGG:
R00513
MetaCyc:
CYTIKIN-RXN
SABIO-RK:
212
|
|
|
|
UTP + cytidine <=> UDP + cytidine_5''-phosphate
|
2.7.1.213
cytidine kinase
2.7.1.48
uridine/cytidine kinase
2.7.1.74
deoxycytidine kinase
|
–
–
–
|
|
BRENDA:
BS380418
KEGG:
R00516
|
|
|
|
ATP + dCMP <=> ADP + dCDP
|
2.7.4.13
(deoxy)nucleoside-phosphate kinase
2.7.4.14
UMP/CMP kinase
2.7.4.25
(d)CMP kinase
2.7.4.3
adenylate kinase
2.7.4.9
dTMP kinase
|
–
–
–
–
–
|
|
BRENDA:
BR49405
KEGG:
R01665
MetaCyc:
RXN-7913
SABIO-RK:
84
|
|
|
|
(R)-5,6-Dihydrothymine + H2O <=> N-carbamoyl-beta-aminoisobutyric_acid
|
3.5.2.2
dihydropyrimidinase
|
–
|
|
KEGG:
R03055
|
|
|
|
dCDP + ATP <=> dCTP + ADP
|
2.7.4.6
nucleoside-diphosphate kinase
|
–
|
|
BRENDA:
BS358245
KEGG:
R02326
MetaCyc:
DCDPKIN-RXN
SABIO-RK:
422
|
|
|
|
CMP + H2O <=> cytosine + D-ribose_5-phosphate
|
3.2.2.10
pyrimidine-5'-nucleotide nucleosidase
|
–
|
|
BRENDA:
BS94787
KEGG:
R00510
MetaCyc:
RXN-14065
|
|
|
|
dTTP + uridine <=> dTDP + UMP
|
2.7.1.48
uridine/cytidine kinase
|
–
|
|
BRENDA:
BS357598
KEGG:
R02097
|
|
|
|
ATP + UTP + L-glutamine + H2O <=> H+ + ADP + phosphate + CTP + L-glutamate
|
6.3.4.2
CTP synthase (glutamine hydrolysing)
|
–
|
|
BRENDA:
BR48389
KEGG:
R00573
MetaCyc:
CTPSYN-RXN
SABIO-RK:
459
|
|
|
|
ATP + UMP <=> ADP + UDP
|
2.7.4.14
UMP/CMP kinase
2.7.4.22
UMP kinase
2.7.4.4
nucleoside-phosphate kinase
2.7.4.8
guanylate kinase
|
–
–
–
–
|
|
BRENDA:
BR48071
KEGG:
R00158
MetaCyc:
RXN-12002
SABIO-RK:
201
|
|
|
|
CTP + H2O <=> H+ + CMP + diphosphate
|
3.6.1.65
(d)CTP diphosphatase
3.6.1.8
ATP diphosphatase
3.6.1.9
nucleotide diphosphatase
|
–
–
–
|
|
BRENDA:
BR50549
KEGG:
R00515
MetaCyc:
RXN0-383
SABIO-RK:
454
|
|
|
|
uridine + H2O <=> D-ribose + Uracil
|
3.2.2.1
purine nucleosidase
3.2.2.3
uridine nucleosidase
3.2.2.7
adenosine nucleosidase
3.2.2.8
ribosylpyrimidine nucleosidase
|
–
–
–
–
|
|
BRENDA:
BR32612
KEGG:
R01080
MetaCyc:
URIDINE-NUCLEOSIDASE-RXN
SABIO-RK:
472
|
|
|
|
5-Methylcytosine + H2O + H+ <=> thymine + NH3
|
3.5.4.1
cytosine deaminase
3.5.4.21
creatinine deaminase
|
–
–
|
|
BRENDA:
BS140966
KEGG:
R01411
MetaCyc:
RXN-14197
|
|
|
|
N-Carbamoyl-beta-alanine + H2O + H+ <=> beta-Alanine + NH3 + CO2
|
3.5.1.6
beta-ureidopropionase
|
–
|
|
BRENDA:
BR19250
KEGG:
R00905
MetaCyc:
BETA-UREIDOPROPIONASE-RXN
SABIO-RK:
461
|
|
|
|
uridine + GTP <=> H+ + UMP + GDP
|
2.7.1.48
uridine/cytidine kinase
|
–
|
|
BRENDA:
BS357585
KEGG:
R00968
MetaCyc:
URKI-RXN
|
|
|
|
cytidine + GTP <=> H+ + CMP + GDP
|
2.7.1.213
cytidine kinase
2.7.1.48
uridine/cytidine kinase
2.7.1.B20
|
–
–
–
|
|
BRENDA:
BS357586
KEGG:
R00517
MetaCyc:
CYTIDINEKIN-RXN
|
|
|
|
thiamine_phosphate + ATP <=> thiamine_diphosphate + ADP
|
2.7.1.21
thymidine kinase
2.7.4.12
T2-induced deoxynucleotide kinase
2.7.4.13
(deoxy)nucleoside-phosphate kinase
2.7.4.16
thiamine-phosphate kinase
2.7.4.3
adenylate kinase
2.7.4.4
nucleoside-phosphate kinase
2.7.4.8
guanylate kinase
2.7.4.9
dTMP kinase
|
–
–
–
–
–
–
–
–
|
|
BRENDA:
BR47844;
BR48076
KEGG:
R00617;
R02094
MetaCyc:
DTMPKI-RXN;
THI-P-KIN-RXN
SABIO-RK:
1007;
14622;
91
|
|
|
|
UDP + H2O <=> phosphate + UMP + H+
|
3.1.3.2
acid phosphatase
3.1.3.31
nucleotidase
3.6.1.15
nucleoside-triphosphate phosphatase
3.6.1.22
NAD+ diphosphatase
3.6.1.42
guanosine-diphosphatase
3.6.1.5
apyrase
3.6.1.6
nucleoside diphosphate phosphatase
3.6.1.9
nucleotide diphosphatase
|
–
–
–
–
–
–
–
–
|
|
BRENDA:
BS141286
KEGG:
R00155
MetaCyc:
RXN-12197
SABIO-RK:
444
|
|
|
|
(Z)-3-ureidoacrylate_peracid + H2O <=> (Z)-3-peroxyaminoacrylate + Carbamate
|
3.5.1.110
ureidoacrylate amidohydrolase
|
–
|
|
KEGG:
R09947
|
|
|
|
H2O + dTMP <=> phosphate + thymidine
|
3.1.3.1
alkaline phosphatase
3.1.3.2
acid phosphatase
3.1.3.31
nucleotidase
3.1.3.32
polynucleotide 3'-phosphatase
3.1.3.34
deoxynucleotide 3'-phosphatase
3.1.3.35
thymidylate 5'-phosphatase
3.1.3.5
5'-nucleotidase
3.1.3.89
5'-deoxynucleotidase
|
–
–
–
–
–
–
–
–
|
|
BRENDA:
BR10688
KEGG:
R01569
MetaCyc:
THYMIDYLATE-5-PHOSPHATASE-RXN
SABIO-RK:
479
|
|
|
|
cytosine + H2O + H+ <=> Uracil + NH3
|
3.5.4.1
cytosine deaminase
3.5.4.3
guanine deaminase
|
–
–
|
|
BRENDA:
BR22732
KEGG:
R00974
MetaCyc:
CYTDEAM-RXN
|
|
|
|
dTTP + cytidine <=> dTDP + CMP
|
2.7.1.48
uridine/cytidine kinase
|
–
|
|
KEGG:
R02096
|
|
|
|
5-Methylbarbiturate + H2O <=> 3-Oxo-3-ureidoisobutyrate
|
3.5.2.1
barbiturase
|
–
|
|
KEGG:
R10777
|
|
|
|
ITP + uridine <=> IDP + UMP
|
2.7.1.48
uridine/cytidine kinase
|
–
|
|
BRENDA:
BS357587
KEGG:
R00970
|
|
|
|
H+ + Barbiturate + H2O <=> 1-carboxymalonamide
|
3.5.2.1
barbiturase
|
–
|
|
BRENDA:
BR22716;
BS367855
KEGG:
R02139
MetaCyc:
BARBITURASE-RXN
|
|
|
|
UDP + ATP <=> UTP + ADP
|
2.7.4.6
nucleoside-diphosphate kinase
|
–
|
|
BRENDA:
BS358242
KEGG:
R00156
MetaCyc:
UDPKIN-RXN
SABIO-RK:
199
|
|
|
|
cytidine + H2O <=> D-ribose + cytosine
|
3.2.2.1
purine nucleosidase
3.2.2.3
uridine nucleosidase
3.2.2.7
adenosine nucleosidase
3.2.2.8
ribosylpyrimidine nucleosidase
|
–
–
–
–
|
|
BRENDA:
BS214504
KEGG:
R02137
MetaCyc:
RXN0-361
|
|
|
|
cytidine_2,3''-cyclic_monophosphate + H2O <=> cytidine-3''-monophosphate + H+
|
3.1.4.16
2',3'-cyclic-nucleotide 2'-phosphodiesterase
3.1.4.55
phosphoribosyl 1,2-cyclic phosphate phosphodiesterase
4.6.1.18
pancreatic ribonuclease
|
–
–
–
|
|
BRENDA:
BS372803
KEGG:
R03929
MetaCyc:
RXN-14112
SABIO-RK:
518
|
|
|
|
1-carboxymalonamide + H2O <=> H+ + malonate + Urea
|
3.5.1.95
N-malonylurea hydrolase
|
–
|
|
BRENDA:
BR48701;
BS378756
KEGG:
R07629
MetaCyc:
3.5.1.95-RXN
|
|
|
|
uridine + ATP <=> H+ + UMP + ADP
|
2.4.2.9
uracil phosphoribosyltransferase
2.7.1.145
deoxynucleoside kinase
2.7.1.21
thymidine kinase
2.7.1.213
cytidine kinase
2.7.1.48
uridine/cytidine kinase
2.7.1.B20
|
–
–
–
–
–
–
|
|
BRENDA:
BR47782
KEGG:
R00964
MetaCyc:
URIDINEKIN-RXN
SABIO-RK:
85
|
|
|
|
N-carbamoyl-beta-aminoisobutyric_acid + H2O + H+ <=> (R)-3-Amino-2-methylpropanoate + NH3 + CO2
|
3.5.1.6
beta-ureidopropionase
|
–
|
|
BRENDA:
BS370777
KEGG:
R04666
MetaCyc:
RXN-11210
|
|
|
|
dUMP + H2O <=> 2''-deoxyuridine + phosphate
|
3.1.3.2
acid phosphatase
3.1.3.31
nucleotidase
3.1.3.34
deoxynucleotide 3'-phosphatase
3.1.3.35
thymidylate 5'-phosphatase
3.1.3.5
5'-nucleotidase
3.1.3.89
5'-deoxynucleotidase
|
–
–
–
–
–
–
|
|
BRENDA:
BS390579
KEGG:
R02102
MetaCyc:
RXN-14143
SABIO-RK:
501
|
|
|
|
dGTP + uridine <=> dGDP + UMP
|
2.7.1.48
uridine/cytidine kinase
|
–
|
|
BRENDA:
BS357595
KEGG:
R01880
|
|
|
|
dUDP + thioredoxin_disulfide + H2O <=> UDP + thioredoxin
|
1.17.4.1
ribonucleoside-diphosphate reductase
1.17.4.2
ribonucleoside-triphosphate reductase (thioredoxin)
|
–
–
|
|
BRENDA:
BS287795
KEGG:
R02018
MetaCyc:
UDPREDUCT-RXN
|
|
|
|
(Z)-3-ureidoacrylate_peracid + NADH <=> ureidoacrylate + NAD+ + H2O
|
not assigned
|
–
|
|
KEGG:
R09981
MetaCyc:
RXN0-6450
|
|
|
|
thymidine + ATP <=> H+ + dTMP + ADP
|
2.7.1.145
deoxynucleoside kinase
2.7.1.21
thymidine kinase
2.7.1.74
deoxycytidine kinase
2.7.1.76
2'-deoxyadenosine kinase
2.7.1.77
nucleoside phosphotransferase
2.7.4.9
dTMP kinase
|
–
–
–
–
–
–
|
|
BRENDA:
BR47761
KEGG:
R01567
MetaCyc:
THYKI-RXN
SABIO-RK:
90
|
|
|
|
H2O + 5,6-dihydrouracil <=> H+ + N-Carbamoyl-beta-alanine
|
3.5.2.16
maleimide hydrolase
3.5.2.2
dihydropyrimidinase
|
–
–
|
|
BRENDA:
BR22718
KEGG:
R02269
MetaCyc:
DIHYDROPYRIMIDINASE-RXN
SABIO-RK:
503
|
|
|
|
ureidoacrylate + H2O <=> 2-aminoacrylate + Carbamate + H+
|
3.5.1.110
ureidoacrylate amidohydrolase
|
–
|
|
BRENDA:
BR50061
KEGG:
R09980
MetaCyc:
RXN0-6460
|
|
|
|
thymine + H2O + acceptor <=> 5-Methylbarbiturate + reduced_acceptor + H+
|
1.17.99.4
uracil/thymine dehydrogenase
|
–
|
|
BRENDA:
BR48668
KEGG:
R01413
MetaCyc:
RXN-8646
|
|
|
|
H2O + UTP <=> H+ + phosphate + UDP
|
3.1.3.2
acid phosphatase
3.1.3.31
nucleotidase
3.1.3.5
5'-nucleotidase
3.1.3.8
3-phytase
3.6.1.15
nucleoside-triphosphate phosphatase
3.6.1.28
thiamine-triphosphatase
3.6.1.39
thymidine-triphosphatase
3.6.1.45
UDP-sugar diphosphatase
3.6.1.5
apyrase
3.6.1.6
nucleoside diphosphate phosphatase
3.6.1.9
nucleotide diphosphatase
3.6.1.B17
3.6.4.12
DNA helicase
3.6.4.13
RNA helicase
3.6.4.B10
3.6.4.B6
7.1.2.1
P-type H+-exporting transporter
7.1.2.2
H+-transporting two-sector ATPase
7.6.2.2
ABC-type xenobiotic transporter
|
–
–
–
–
–
–
–
–
–
–
–
–
–
–
–
–
–
–
–
|
|
BRENDA:
BS141412
KEGG:
R00159
MetaCyc:
RXN-12196
SABIO-RK:
200
|
|
|
|
dGTP + cytidine <=> dGDP + CMP
|
2.7.1.48
uridine/cytidine kinase
|
–
|
|
KEGG:
R02091
|
|
|
|
dUTP + uridine <=> dUDP + UMP
|
2.7.1.48
uridine/cytidine kinase
|
–
|
|
BRENDA:
BS357596
KEGG:
R02332
|
|
|
|
H+ + dCMP + H2O <=> NH3 + dUMP
|
3.5.4.12
dCMP deaminase
|
–
|
|
BRENDA:
BR29523
KEGG:
R01663
MetaCyc:
DCMP-DEAMINASE-RXN
SABIO-RK:
363
|
|
|
|
dTTP + H2O <=> dTMP + diphosphate + H+
|
3.6.1.12
dCTP diphosphatase
3.6.1.23
dUTP diphosphatase
3.6.1.39
thymidine-triphosphatase
3.6.1.55
8-oxo-dGTP diphosphatase
3.6.1.65
(d)CTP diphosphatase
3.6.1.8
ATP diphosphatase
3.6.1.9
nucleotide diphosphatase
|
–
–
–
–
–
–
–
|
|
BRENDA:
BS141256
KEGG:
R11323
MetaCyc:
RXN0-5107
SABIO-RK:
10421;
10443
|
|
|
|
L-dihydroorotate + H2O <=> H+ + L-carbamoyl-L-aspartate
|
3.5.2.3
dihydroorotase
|
–
|
|
BRENDA:
BR26106
KEGG:
R01993
MetaCyc:
DIHYDROOROT-RXN
SABIO-RK:
399
|
|
|
|
2''-Deoxy-5-hydroxymethylcytidine-5''-diphosphate + ATP <=> 2''-Deoxy-5-hydroxymethylcytidine-5''-triphosphate + ADP
|
2.7.4.6
nucleoside-diphosphate kinase
|
–
|
|
KEGG:
R00139
|
|
|
|
(R)-5,6-Dihydrothymine + NADP+ <=> thymine + NADPH + H+
|
1.3.1.2
dihydropyrimidine dehydrogenase (NADP+)
|
–
|
|
KEGG:
R01415
|
|
|
|
H+ + CTP + H2O <=> UTP + NH3
|
3.5.4.13
dCTP deaminase
3.5.4.5
cytidine deaminase
|
–
–
|
|
BRENDA:
BS367867
KEGG:
R00568
MetaCyc:
RXN-14118
|
|
|
|
(Z)-3-peroxyaminoacrylate <=> 2-aminoacrylate
|
not assigned
|
–
|
|
KEGG:
R09982
|
|
|
|
H+ + orotidine_5''-phosphate <=> CO2 + UMP
|
4.1.1.23
orotidine-5'-phosphate decarboxylase
|
–
|
|
BRENDA:
BR284
KEGG:
R00965
MetaCyc:
OROTPDECARB-RXN
SABIO-RK:
463
|
|
|
|
2''-deoxyuridine + ATP <=> H+ + dUMP + ADP
|
2.7.1.145
deoxynucleoside kinase
2.7.1.21
thymidine kinase
2.7.1.74
deoxycytidine kinase
2.7.1.76
2'-deoxyadenosine kinase
|
–
–
–
–
|
|
BRENDA:
BS353774
KEGG:
R02099
MetaCyc:
DURIDKI-RXN
SABIO-RK:
500
|
|
|
|
ATP + dUMP <=> ADP + dUDP
|
2.7.4.13
(deoxy)nucleoside-phosphate kinase
2.7.4.14
UMP/CMP kinase
2.7.4.22
UMP kinase
2.7.4.25
(d)CMP kinase
2.7.4.4
nucleoside-phosphate kinase
2.7.4.9
dTMP kinase
2.7.4.B1
|
–
–
–
–
–
–
–
|
|
BRENDA:
BS359746
KEGG:
R02098
MetaCyc:
RXN-14122
SABIO-RK:
499
|
|
|
|
ATP + 5-hydroxymethyl-dCMP <=> ADP + 5-hydroxymethyl-dCDP
|
2.7.4.12
T2-induced deoxynucleotide kinase
|
–
|
|
BRENDA:
BS358192
KEGG:
R00140
|
|